Memory Gene Goes Viral

NIH-funded research reveals novel method for transferring genetic material between neurons

January 16, 2018 • Press Release

Two independent teams of scientists from the University of Utah and the University of Massachusetts Medical School have discovered that a gene crucial for learning, called Arc, can send its genetic material from one neuron to another by employing a strategy commonly used by viruses. The studies, both published in Cell, unveil a new way that nervous system cells interact.

“This work is a great example of the importance of basic neuroscience research,” said Edmund Talley, Ph.D., a program director at the National Institute of Neurological Disorders and Stroke (NINDS), part of the National Institutes of Health. “What began as an effort to examine the behavior of a gene involved in memory and implicated in neurological disorders such as Alzheimer’s disease has unexpectedly led to the discovery of an entirely new process, which neurons may use to send genetic information to one another.”

While Arc is known to play a vital role in the brain’s ability to store new information, little is known about precisely how it works. In addition, previous studies had detailed similarities between the Arc protein and proteins found in certain viruses like HIV, but it was unclear how those commonalities influenced the behavior of the Arc protein.

The University of Utah researchers began their examination of the Arc gene by introducing it into bacterial cells. To their surprise, when the cells made the Arc protein, it clumped together into a form that resembled a viral capsid, the shell that contains a virus’ genetic information. The Arc “capsids” appeared to mirror viral capsids in their physical structure as well as their behavior and other properties.

“Beforehand, if I had said to any neuroscientist that this gene sort of acts like a virus, they would have laughed at me,” said Jason Shepherd, Ph.D., an assistant professor at the University of Utah in Salt Lake City, Utah. “We knew this was going to take us in a completely new direction.”

The University of Massachusetts scientists, led by Vivian Budnik, Ph.D., a professor at UMass Medical School, and Travis Thomson, Ph.D., an assistant professor at the institution, set out to scrutinize the contents of tiny sacks released by cells called extracellular vesicles. Their experiments in fruit flies revealed that motor neurons that control the flies’ muscles release vesicles containing a high concentration of the Arc gene’s messenger RNA (mRNA), the DNA-like intermediary molecule cells use to create the protein encoded by a DNA sequence. Both groups also found evidence that Arc capsids contain Arc mRNA and that the capsids are released from neurons inside those vesicles. In addition, Dr. Shepherd’s team showed that the more active neurons are, the more of those vesicles they release.

Further experiments performed by both teams of researchers suggested that Arc capsids act like viruses by delivering mRNA to nearby cells. Dr. Shepherd and his colleagues grew mouse neurons lacking the Arc gene in petri dishes filled with Arc-containing vesicles or Arc capsids alone. They discovered that the formerly Arc-less neurons took in the vesicles and capsids and used the Arc mRNA contained within to produce the Arc protein themselves. Finally, just like neurons that naturally manufacture the Arc protein, those cells made more of it when their electrical activity increased.

The UMass researchers, meanwhile, showed that Arc mRNA and capsids travel only in a single direction between fly cells – from motor neurons to muscles – and that the Arc protein binds to a specific part of the Arc mRNA molecule called the untranslated region that is not used to make the Arc protein. They also found that flies lacking the Arc gene form fewer connections between their motor neurons. Moreover, while normal flies create more of these connections when their motor neurons are more active, flies without the Arc gene failed to do so.

Both groups of scientists now plan to investigate why cells use this virus-like strategy to shuttle Arc mRNA between cells and whether this system might allow the toxic proteins responsible for Alzheimer’s disease to spread through the brain. Dr. Budnik hopes that such research will shed light on the development of neurological diseases and potentially lead to new therapies.

In addition, Dr. Shepherd believes it may be possible to use Arc capsids for genetic engineering and gene therapy, which currently use viruses to introduce new genetic instructions into cells. The human immune system sometimes attacks those viruses, causing dangerous side effects. Because the Arc protein is native to the human body, clinicians may be able to use Arc capsids to deliver genes for gene therapy without triggering an immune response.

“This research highlights the fact that we often don’t know where the cool discoveries are going to come from,” Dr. Shepherd said. “We need to follow where the science takes us.”

Dr. Shepherd’s work was supported by the NINDS (NS076364), the NIH’s National Institute of Mental Health (MH112766), and the NIH’s National Institute of General Medical Sciences (GM77582 and GM112972). Dr. Budnik’s and Dr. Thomson’s research was supported by the National Institute of Mental Health (MH070000).

Viral capsid. Memory gene acts like a virus: Two independent teams of NIH-funded researchers discovered that the Arc gene can package its genetic material in a virus-like shell for delivery to nearby cells.
Source: NIH

References

The Neuronal Gene Arc Encodes a Repurposed Retrotransposon Gag Proteinthat MediatesIntercellular RNA Transfer.  Pastuzyn ED, Day CE, Kearns RB, Kyrke-Smith M, Taibi AV, McCormick J, Yoder N, Belnap DM, Erlendsson S, Morado DR, Briggs JAG, Feschotte C, Shepherd JD. Cell. 2018 Jan 11;172(1-2):275-288.e18. doi: 10.1016/j.cell.2017.12.024.
PMID: 29328916

Retrovirus-like Gag Protein Arc1 Binds RNA and Traffics across Synaptic Boutons. 
Ashley J, Cordy B, Lucia D, Fradkin LG, Budnik V, Thomson T. Cell. 2018 Jan 11;172(1-2):262-274.e11. doi: 10.1016/j.cell.2017.12.022. PMID: 29328915

The National Institute of Neurological Disorders and Stroke (NINDS ) is the nation’s leading funder of research on the brain and nervous system. The mission of NINDS is to seek fundamental knowledge about the brain and nervous system and to use that knowledge to reduce the burden of neurological disease.

About the National Institute of Mental Health (NIMH): The mission of the NIMH  is to transform the understanding and treatment of mental illnesses through basic and clinical research, paving the way for prevention, recovery and cure. For more information, visit the NIMH website.

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About the National Institutes of Health (NIH): NIH, the nation's medical research agency, includes 27 Institutes and Centers and is a component of the U.S. Department of Health and Human Services. NIH is the primary federal agency conducting and supporting basic, clinical, and translational medical research, and is investigating the causes, treatments, and cures for both common and rare diseases. For more information about NIH and its programs, visit the NIH website .

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